Example Any words: php_solr

Example All words: Simple PHP Agenda

Pivot Collection Tool for the Command Line

Pauthor is a tool for creating Pivot (http://getpivot.com) collections. It contains a command-line application to convert collections between a variety of formats, a C# library you can use in your application, and documentation describing the entire system.

asgbookphp

EnglishA file-based guest book and does not use a MySQL database. Easy installation and customization. It removes HTML. Includes visible/invisible mode for messages. Edit and delete users messages. A guestbook that is templated, easily modified to fit your site's design. TürkçeMySQL gerektirmeyen, verilere metin dosyasına kaydeden PHP ziyaretçi defteridir. Kurulumu kolay ve özelleştirilebilir. Mesajda HTML kodlarını temizler(bazıları hariç). Onaylanmamış mesajlar istenirse gösterilmez. Gönderilen mesajlar değişltirilebilir ya da silinebilir. Şablon kullanımı vardır. Web sayfanıza uygun düzenlemeler yapılabilir.

guestbook text nomysql php free

mflab

mfLab (which stands for MODFLOW-laboratory) is an environment designed for efficient and flexible groundwater modeling using members of the MODFLOW suite, i.e. MT3DMS, SEAWAT etc. and including feature extending packages for them. These packages are numerous, each designed to model a specific groundwater flow process or boundary condition type (see http://water.usgs.gov/nrp/gwsoftware/modflow.html). Perhaps best of all, these programs and packages are open-source and free of charge, and used every day by a wide groundwater modeling community worldwide. In mfLab, the modeling workflow is scripted and, therefore, it is reproducible, which is hard if not impossible to achieve with a graphical user interface (GUI). mfLab exploits the interactive environment of Matlab, (or the free environments of Octave or Scilab) to: 1) create models, 2) to write their input files, and 3) to process and visualize their output, while 4) an Excel file is used as a multi-page container for simulation parameters and partly as a manual. The flexibility and power of this modeling environment is believed to be unmatched by any GUI currently on the market. Moreover, Matlab's scripting ability makes modeling reproducible, which is an essential prerequisite of any quality assurance, which is generally impossible with GUI's. The environment Matlab/Octave/Scilab provides, allows line by line interactive script development, visualization, testing and debugging. This guarantees a fast, yet secure workflow. This environment allows access to external databases, GISes and facilitates integration and combination with other models, output processing and visualization. Turning scripts into functions is the way to generalize scripts and develop the environment further with the aim to make any groundwater modeling feature and process available to its users as they exist and will be developed in the future. The value of mfLab has been proven already. It is being used by students of the Delft University of Technology, (abbrev. TUDelft) and others, as well as within Waternet (i.e. Amsterdam Water Supply). It is put on the web under freeware license to encourage joint development as nobody can implement the wide gamma of groundwater modeling enhancement packages on his/her own in any reasonable time span. I will predominantly develop in Matlab because Matlab is available to all students and staff of TUDelft, where I teach. However, it is strongly encouraged to develop jointly in Octave and Scilab, which are freeware Matlab clones that are virtually line by line compatible. This way, mflab is free to everyone, which, I hope will benefit education, research, and developing countries in general ! Theo Olsthoorn tolsthoorn+mfLab@gmail.com Hydrologist at Waternet http://www.waternet.nl, Groundwater professor at TUDelft http://www.tudelft.nl/en/ http://www.citg.tudelft.nl/live/pagina.jsp?id=0331ebea-87f3-46e9-b570-44f762a4a5a6&lang=en For reference to the mentioned interactive computational environments see http://www.mathworks.com/products/matlab/, http://www.gnu.org/software/octave/ and http://www.scilab.org/ To get your working copy see the wiki page of this site.

groundwater mt3dms seawat modflow mflab

spring-on-rails

Spring-On-RailsSimple idea, great benefit What is Spring-On-Rails?Spring-On-Rails is a rapid Java Enterprise Application development Framework, distantly related to Ruby-on-Rails. Spring-On-Rails is designed to help developers generate a basic skeleton of CRUD-type applications. The generated application is based upon the Spring Framework, Ibatis and Hibernate for Java in the middle tier. The basic process of Spring-On-Rails development is very simple: define an object/relational mapping, then run an ant task or maven archetype + plugin to generate the project structure. This generates a simple create/update/read/delete web or web service application. It's early in its lifecycle; hopefully others will find it useful. It's licensed under the ASL 2.0. Release Notes - 10/7/2007 Development Road Map How-to install Spring-On-Rails Getting start tutorial in 5 minutes Integrate with your favorite IDE Anatomy of entity mapping file One Page Manual a little history about this project Checkout latest development realse with Subversionsvn checkout http://spring-on-rails.googlecode.com/svn/trunk/ spring-on-rails New Features10/8/2007 Reverse mapping from database has been added to latest release 1.0.2 (all). You do not have to create entity mapping before using Spring-On-Rails. You need configure jdbc configuration in meta tag in order to use reverse mapping function. 10/6/2007 XFire Web Service Support Added as version 1.1.2 refer to wiki for configuration. Default web service WSDL URI : http:// :8080//spring/Service?WSDL Help wanted!!!!Looking for Web Designer, technical writer, PHP Developer, and JEE developer to join this project. Features planned for next releaseHibernate 3 (implemented) EJB 3.0 JSF? Modify and enhanced generated applicationAs its' name implied, it requires knowledge of Java(TM), Spring Framework, and Ibatis. Maven is addtional requirement, if you want to leverage RAD support with Jetty. How to request for additional featuresPlease send request email to spring-on-rails-developers@googlegroups.com DisclaimerThis project is neither sponsored by my employer, nor any organization. It is solely developed at my freetime as experiment. Neither my employer, nor I should have any resposibilities if it causes unexpected damage to your device or data. Communicationspring-on-rails-developers@googlegroups.com http://groups.google.com/group/spring-on-rails-developers EnjoySunny Liu, September 1, 2007

springframework jee rails spring

apache-rat-pd

Apache RAT plagiarism detector What is it? Apache RAT plagiarism detector is command-line tool for searching the code base for possibly plagiarized code using web code search engines. Shortly - it checks if source code is cut&pasted from somewhere by searching on Google code search, Koders code search.... Tool is still unfinished with very basic usability..... This simple tool is based on this idea: http://wiki.apache.org/general/SummerOfCode2009#rat-project More information can be found on: http://wiki.apache.org/general/MarijaSljivovic/SoC2009ApacheRatProposal Source code repository: http://code.google.com/p/apache-rat-pd/ Old source and project information are on: http://issues.apache.org/jira/browse/RAT-45 Running apache-rat-pd: Make sure that apache-rat-core-0.6.jar ,gdata-core-1.0.jar,gdata-codesearch-2.0.jar and commons-lang-2.1.jar are in same folder with apache-rat-pd-1.0-SNAPSHOT.jar. 2.Run command "java -jar apache-rat-pd-1.0-SNAPSHOT.jar" Usage is: java -jar apache-rat-pd.jar [options] Options: -c,--config name of the config file -cb,--codebase name of source code directory -e,--engines list of engines -h,--help print this message -heur,--heuristics list of heuristics -l,--limit integer from 1 to 100,1 is almost brute force and 100 is heuristic -lang,--language name of a language -r,--report name of the report file; extension of file determines report format: .xml - report will be xml document .html - report will be html document .txt - report will be txt document Default is report.html. -v,--verbose verbose description of current actions Example of config file: -cb c:/src -e GoogleCodeSearchParser,myParser -heur BruteForceHeuristicChecker -limit 10 -r myreport.htmlFor -heuristics, legal options are: -available comment heuristics checkers: JavaCommentHeuristicChecker,CPPCommentHeuristicChecker,PascalCommentHeuristicChecker,ShellCommentHeuristicChecker,ActionScriptCommentHeuristicChecker PerlCommentHeuristicChecker,JavaScriptCommentHeuristicChecker,CSharpCommentHeuristicChecker,CCommentHeuristicChecker,CobolCommentHeuristicChecker, ColdFusionCommentsheuristicChecker,DelphiCommentHeuristicChecker,FortranCommentHeuristicChecker,HTMLCommentHeuristicChecker,LispCommentHeuristicChecker, PHPCommentHeuristicChecker,PythonCommentHeuristicChecker,RubyCommentHeuristicChecker,SQLCommentHeuristicChecker,VisualBasicCommentHeuristicChecker, -available functions heuristics checkers are: ActionScriptFunctionHeuristicChecker, CFunctionHeuristicChecker,CPPFunctionHeuristicChecker, CSharpFunctionHeuristicChecker, DelphiFunctionHeuristicChecker, JavaFunctionHeuristicChecker,JavaScriptFunctionHeuristicChecker, PascalFunctionHeuristicChecker, PHPFunctionHeuristicChecker -MisspellingsHeuristicChecker -BruteForceHeuristicChecker Changes: version 0.1.0 -Now it is possible to pause checking process and resume after that just by pressing enter. That way,if search engine starts to not respond to the queries,user can pause execution of an actions for as long as it is needed for search engine to start responding to the queries again. - Reports can be exported as html, txt or xml files. - A few bugs have been fixed. version 0.0.9.1 -Bug in GoogleCodeSearchParser is fixed. Now this tool can communicate with Google Code Search much better. -New heuristic checkers for recognising functions are written: ActionScriptFunctionHeuristicChecker, CFunctionHeuristicChecker, CPPFunctionHeuristicChecker, CSharpFunctionHeuristicChecker, DelphiFunctionHeuristicChecker, JavaFunctionHeuristicChecker, JavaScriptFunctionHeuristicChecker, PascalFunctionHeuristicChecker, PHPFunctionHeuristicChecker,VisualBasicHeuristicChecker, FortranHeuristicChecker -New heuristic checker for recognising misspellings is written: MisspellingsHeuristicChecker. For now, it can only find misspellings in English language. -Algorithm which generate regular expressions for GoogleCodesearch is improved.It can produce regular expression which GoogleCodeSearch understands better then previous -Results returned from GoogleCodeSearch are now analyzed again locally to get better results. -All new classes are covered by junit tests. -There is simple progress indicator when apache-rat-pd is running. version 0.0.8 -Support for multiple search engines checking is added to core algorithm. -New heuristic parsers are added. They cover heuristic matching of comment in most popular programming languages. -Now, there is ability for apache-rat-pd to wait certain amount of time between two queries and retry query if there is some error occurred. -Refactor of code has been done. Tests coverage is increased. version 0.0.7 -Now command line can parse all arguments and can parse it from config file,too. In use is commons-cli in version 1.1. Project now depends from apache-rat-core-0.6.jar ,gdata-core-1.0.jar,gdata-codesearch-2.0.jar, commons-lang-2.1.jar, junit(junit-3.8.1.jar) and commons-cli-1.1.jar. Tests for it are written. version:0.0.6 -GoogleCodesearch engine is switched from using html parser to using grata-codesearch API. Because gdata api is not mavenized, adding it to local maven repository must be done manually. Script files that do that task are written. Project now depends from apache-rat-core-0.6.jar ,gdata-core-1.0.jar,gdata-codesearch-2.0.jar, commons-lang-2.1.jar and junit(junit-3.8.1.jar). version:0.0.5 -After code-reviews(https://issues.apache.org/jira/browse/RAT-45) it is decided not to use enums and if/switch, but inheritance and polymorphism if it is possible. This leads to more simple classes. JavaCommentsHeuristicChecker and PascalCommentsHeuristicChecker are written. In these classes regular expressions are used for comment matching. Some tests for these classes are written, too. version:0.0.4 -Improved maven support. Issue with wrong package structure in jar file generated by maven is corrected. Custom manifest file is added to project. Project depends from apache-rat-core(apache-rat-core-0.6.jar), commons-lang-2.1.jar and junit(junit-3.8.1.jar). version:0.0.3 -added support for maven, project depends from apache-rat-core(apache-rat-core-0.6.jar) and junit(junit-3.8.1.jar). maven can build project but package structure inside jar is not correct. This must be corrected. version:0.0.2 -project changed by some of recommendations which can be found at: http://issues.apache.org/jira/browse/RAT-45 -added basic support for reading whole directories of source files version:0.0.1 -in core algorithm is added support for heuristic algorithms. Building project: Download apache rat source (http://www.apache.org/dist/incubator/rat/apache-rat-incubating-current-src.zip) and unarchive it. Run "mvn install" on pom.xml which is part of apache-rat-source To add gdata-core and gdata-codesearch jars to local maven repository, execute two bat files from additional.dependencies folder. Unarchive source code from this archive. Run "mvn package" on pom.xml which is part of apache-rat-pd, apache-rat-pd-1.0-SNAPSHOT.jar will be generated.

java

sortpom

Maven-SortPom-PluginMaven plugin that helps the user sort pom.xml. The default sort order is taken from the Maven pom documentation. The main advantage to have standardized sorted poms, is that comparisons between different projekt poms becomes much easier. Goals OverviewThe SortPom Plugin has only one goal. com.google.code.sortpom:maven-sortpom-plugin:sort sorts the current pom.xml file. By default it saves a backup copy named pom.xml.bak before sorting. Parameters Commandline Configurationtag Default value Description -Dsort.pomFile=myPom.xml myPom.xml pom.xml Location of the pomfile -Dsort.createBackupFile=false false true Should a backup copy be created before sorting the pom -Dsort.backupFileExtension=.old .old .bak Name of the file extension for the backup file -Dsort.encoding=ASCII ASCII UTF-8 Encoding for the files -Dsort.lineSeparator=\n \n line.separator Line separator for sorted pom. Can be either \n, \r or \r\n -Dsort.sortOrderFile=src/main/resources/customSortOrder.xml src/main/resources/customSortOrder.xml internal Custom sort order file read from either executing path or classpath DownloadMaven users can add this project as a dependency with the following additions to a POM.xml file: googlecode.mindi-f http://mindi-f.googlecode.com/svn/repo googlecode.sortpom http://sortpom.googlecode.com/svn/repo com.google.code.sortpom maven-sortpom-plugin 0.2.3 false sort verify Versions 0.1.1 First working version 0.2.0 All custom parameters implemented 0.2.1 Solved strange dependency for qdox. Generated runtime exception under Linux 0.2.3 Read sortOrderFile from executing path or classpath

lineseparator sortorder encoding java pomxml plugin maven sort pom

spring-hibernate3-annotations-tutorial

Tutorial for Using Spring with Hibernate 3 Annotations and Maven,

persistence hibernate maven hibernate3 jdbc spring

jruby-rails-jetty-skeleton

Skeleton for JRuby 1.6.7, Rails 3.2.3, Jetty 8.1.3 using maven & warbler,

fragmentation-analyzer

Fragmentation AnalyzerNews What is Fragmentation Analyzer? Supported Input Data Downloading and Installing Requirements Downloading Troubleshooting Tutorial Importing Data Supported Text File Format Upgrading Support Source Screenshots NewsFebruary 27. 2010: Fragmentation Analyzer v1.5 is now available: Two new plotting types have been added: Intensity Correlation and Intensity Meta Plots. Both to help analyze the varations in intensity. Fixed the plotting colors so that b ions are always blue and y ions are always red in all plots. See ReleaseNotes for complete list of changes. January 11. 2010: Fragmentation Analyzer v1.4.3 is now available: Fixed a bug in the accuracy drop down menu for the 'Individual Spectra' table. Renamed and reordered the scoring types in the preference dialog. See ReleaseNotes for complete list of changes. December 04. 2009: Fragmentation Analyzer v1.4.2 is now available: It's now possible to duplicate some of the plot internal frames without having to recreate the plot. Moved the text for the fragment ion markers so that singly charged b and y ions no longer overlap. See ReleaseNotes for complete list of changes. Go to top of page What is Fragmentation Analyzer?Fragmentation Analyzer is a tool for analyzing MS/MS fragmentation data. Currently nine different analysis types are supported: Spectra Visualization - visualize the MS/MS spectra with fragment ion annotation, zooming and manual de-novo-sequencing. Intensity Box Plots - analyze intensity variation for a set of identification of the same peptide. Mass Error Scatter Plots - visualize the mass error spread in a set of selected identifications/spectra. Mass Error Bubble Plots - same as Mass Error Scatter Plots but with peak intensities added. Mass Error Box Plot - analyze the variation in mass errors. Fragment Ion Probability Plot - analyze the probability of observing specific fragment ions. Fragment Ion Heat Map - compare fragmentations using heat maps of correlation data. Intensity Correlation - detect how the intensity correlates with the spread in intensity. Intensity Meta Plots - further analyze the variations in intensity. See the screenshots for examples of the tool in action. Fragmentation Analyzer has been developed by Harald Barsnes (University of Bergen, Norway under the guidance of Prof. Dr. Lennart Martens. Go to top of page Supported Input DataFragmentation Analyzer currently supports three input formats: ms_lims 7 Mascot Dat Files OMSSA OMX Files In addition any files that can be converted to the supported text file format supported text file format can be used. (See the importing data section for details on how to import data.) Go to top of page Downloading and InstallingRequirementsFragmentation Analyzer requires Java 1.5 (or newer), which you can download for free here. Most modern computers will have Java installed already, so first try to follow the instructions below to download and run Fragmentation Analyzer before downloading Java. You only need the JRE version (and not the JDK version) to run Fragmentation Analyzer. Unless your data is stored in, or can be converted to, one of the supported data formats, the software will unfortunately not be of much help. The current version has been tested on Windows XP, Windows Vista, Mac and Linux, but should also work on other platforms, as long as Java 1.5 (or newer) is installed. If you come across problems on your platform please let us know. Go to top of page DownloadingFollow the download link, and download the latest version of FragmentationAnalyzer_X.Y.zip (where X and Y represent the version of the software). Unzipping the file, creates the following directory structure: FragmentationAnalyzer_X.Y FragmentationAnalyzer-X.Y.jar README.txt Properties (folder) DataSets (folder) lib (folder)To start the software, simply double-click the file named FragmentationAnalyzer-X.Y.jar. If this fails, try to download and install Java 1.5 or above, as explained in the previous section. (The program can also be started from the command line using the following command: java -jar FragmentationAnalyzer-X.Y.jar.) A Fragmentation Analyzer icon that can be used for shortcuts etc linking to the program is included in the zip file. An example data set is included in the DataSet folder. Go to top of page TroubleshootingDoes Not Start - If nothing happens when double clicking the Fragmentation Analyzer jar file, the most likely cause is that you don't have Java installed. Download the latest version of Java here and try again. (You only need the JRE version (and not the JDK version) to run Fragmentation Analyzer.) Does Not Start II - If Fragmentation Analyzer fails during start-up and you get the "Fragmentation Analyzer - Startup Failed" message, a file called fragmentation_analyzer.log will be created in your home directory. In this file you will find detailed information about why the program was not able to start. Does Not Start III - The most likely reason for the "Fragmentation Analyzer - Startup Failed" message is that you have installed Fragmentation Analyzer in a path containing special characters, i.e. [, %, æ, ø, å, etc. Move the converter to a different folder or rename the folder(s) causing the problem and try again. (On Linux Fragmentation Analyzer also has to be run from a path not containing spaces). Does Not Start IV - Another reason for the "Fragmentation Analyzer - Startup Failed" message could be that you have set the upper memory limit higher than your computer can handle (see points below). General Error Diagnosis - In the Properties folder (see section above for the folder structure), there is a file called ErrorLog.txt. This file contains transcripts of any errors that the application has encountered, and can be very useful in diagnosing your problem. Memory Issues - Big datasets can require a lot of memory. If the software unexpectedly fails on a big data set, and the software mentions that it ran out of memory, you should try to give the program more memory. This can be done by editing the JavaOptions.txt file in the Properties folder (see section above for the folder structure). In this file, change the -Xmx768M option to a higher number (e.g., -Xmx1500M for a maximum of appr. 1.5GB of memory). Please note that on a 32-bit operating system you can not increase this value beyond 2000M. Problem Not Solved? Or Problem Not In List Above? - See Support. Go to top of page TutorialSee Tutorial. Go to top of page Importing DataData can be imported from three different sources: ms_lims Mascot Dat Files OMSSA OMX Files ms_limsFor ms_lims one logs on to the ms_lims database via a dialog in the tool using ones normal login details. When connected all the required details about the identifications will be downloaded, while some details, e.g., the fragment ion information, is not downloaded but extracted when needed. The database connection will therefore be required during the use of the tool. Please note that depending on the size of the database the process of importing data from ms_lims might take a while. However, the progress of the import will be monitored closely and presented to the user. Mascot Dat FilesWhen importing Mascot dat files one simply selects the set of dat files to import and select the Mascot confidence level to use for the identifications. Only identifications above the selected confidence will be imported. OMSSA OMX FilesImporting OMSSA omx files is done in the same way as for Mascot dat files (except for the setting of the Mascot confidence level of course). However, the instrument name is not included in the omx file and has to be provided manually by the user for each imported file. Also note that the omx file includes very little details about the amino acid modifications, only a number , etc. The OMMSA installation folder (containing the mods.xml and usermods.xml files) therefore also has to be provided. Go to top of page Supported Text File FormatWhen a data set is imported into Fragmentation Analyzer it is divided into three parts: identifications.tx - details about the peptide identifications fragmentIons.txt - details about the fragment ions a folder of pkl files - details about the spectra identifications.txtFor ms_lims data only the identifications.txt file is created. The remaining information is extracted from the database when needed. However, a file called 'ms_lims.prop' is also created containing information about the database used. identifications.txt is a tab separated text file where the first line includes the number of lines in the file, i.e., the number of identifications. The rest of the file consists of one row per identification with the following elements: a unique identification index - Integer the identified peptide sequence (without terminals and modifications) - String the modified peptide sequence (with terminals and modifications) - String peptide precursor charge - Integer name of instrument used - String name of corresponding pkl spectrum file (see below) - String spectrum file id (if in ms_lims database) - Integer the total intensity of all the peaks in the spectrum - Double original file name (a reference to the original spectrum file) - String Either spectrum file name or spectrum id has to be provided, but the other can be set to "null". fragmentIons.txtfragmentIons.txt is also a tab separated consisting of one row per fragment ion with the following elements: a unique fragment ion index - Integer identification index (a reference to the identification the fragment comes from - Integer fragment ion type, e.g., y2, b3-H20 etc. - String fragment ion m/z value - Double fragment ion intensity - Double fragment ion number, e.g., y2 has the fragment ion number 2 - Double fragment ion mass error (the (absolute) distance between the theoretical and the experimental mass of the fragment ion (experimental mass - theoretical mass)) - Double The following fragment ion type names are recommended and will result in the best integration with the tool: Standard fragment ions, singly charged: b1, b2, y1, y2, etc. Neutral loss ions: y5-H2O, y4-NH3, etc. Doubly charged fragment ions: b2++, b4++-NH3, etc. Precursor ions: Prec, Prec-H2O 2+, etc. Immonium ions: iA, iC, etc. Spectra FolderFor non-ms_lims data sets the spectra are stored as pkl files in a folder called 'spectra'. One file per spectrum. The first line in each file contains the precursor m/z, intensity and charge. Next follows one line per peak in the spectrum with the m/z and intensity values. For more details see the example data set or the source code. Go to top of page UpgradingWhen a new version of Fragmentation Analyzer becomes available, existing users will be notified of this the next time they start the program. Upgrading is done by downloading the latest version from the download section, unzipping the file in a (preferably) empty folder, and then double clicking on the FragmentationAnalyzer_X.Y.jar file. Upgrading does not delete the older version of Fragmentation Analyzer. But after making sure that the new version is working, you can safely delete the folder containing the old version. Installing the new version in the same folder as the previously installed version can result in problems and is not recommended. DataSets created using the previous version are not automatically imported, but this can easily be achieved by copying the contents of the old DataSet folder into the DataSet folder of the newly installed version of Fragmentation Analyzer (see section above for the folder structure). A detailed overview of the changes between each Fragmentation Analyzer version can be found in the Release Notes. Go to top of page SupportFor questions or additional help, feel free to contact the authors. If appropriate please include a (preferably zipped) copy of the ErrorLog.txt file from the Properties folder. Go to top of page SourceThe source code can be viewed and downloaded by clicking the Source tab. It has mainly been developed using Netbeans, and is built and deployed using Maven. Fragmentation Analyzer also uses code from a couple of other projects: ms_lims - mass spectrometry laboratory information management system MascotDatfile Library OMSSA Parser JGoodies - Looks SwingLabs SwingX JFreeChart Spectrum Panel etc Commons-Math: The Apache Commons Mathematics Library Batik SVG Toolkit Go to top of page Screenshots(Click on the screenshot to see the full size version) Screenshot 1: Main interface of Fragmentation Analyzer. Go to top of page (Click on the screenshot to see the full size version) Screenshot 2: Boxplot of fragment ions for modified vs unmodified peptides. Go to top of page (Click on the screenshot to see the full size version) Screenshot 3: MS/MS spectra with fragment ion annotation. Go to top of page (Click on the screenshot to see the full size version) Screenshot 4: Mass Error Bubble Plot. Size of bubble relative to intensity. Color coding: instrument type. Go to top of page (Click on the screenshot to see the full size version) Screenshot 5: Mass Error Bubble Plot. Size of bubble relative to intensity. Color coding fragment ion type. Go to top of page (Click on the screenshot to see the full size version) Screenshot 6: Fragment Ion Probability Plot. Go to top of page (Click on the screenshot to see the full size version) Screenshot 7: Fragment Ion Heat Map - analyze the correlation of different fragmentation patterns. Go to top of page

mascot fragmentions proteomics massspectrometry ms_lims omssa

struts2plugin-maven-repo

This project is a maven repository for unofficial Struts 2 Plugins. Click here to visit the Struts 2 Plugin Registry. Click here to browse the available plugins. To allow maven to use this repository, add the following to your pom.xml: ... ... Maven Plugin Repository http://struts2plugin-maven-repo.googlecode.com/svn/trunk/ false true Then add the dependency for the plugin, for example: com.googlecode.struts2scopeplugin struts2-scope-plugin 1.0.3

s2 maven struts2